What Are Some Popular Methods for Trajectory Inference?
There are several algorithms and tools available for trajectory inference, each with its own strengths and weaknesses. Some popular methods include:
Monocle: One of the earliest and most widely used tools for trajectory inference. Slingshot: A method that builds trajectories based on principal curves. PAGA: Utilizes graph abstraction to model cell trajectories. SCORPIUS: Uses dimensionality reduction and clustering to infer trajectories.
