fusion gene identification

What Challenges Exist in Fusion Gene Identification?

Identifying fusion genes is a complex task with several challenges:
Complexity of Cancer Genomes: Cancer genomes often have multiple mutations and structural variations, making it difficult to pinpoint specific fusion genes.
Low Abundance: Some fusion genes are expressed at low levels, requiring highly sensitive techniques for detection.
False Positives: High-throughput methods like NGS can produce false positives, necessitating additional validation steps.

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